Post Doctoral Fellow-MSH

Key Skills

Computational Algorithms, Data Discovery, Effective communication skills, Flax Programming Language, Genetics, High performance computing- HPC, Longitudinal analysis, Metabolomics, Presentation skills, Python Programming, R Programming, Terabyte scale datasets, Transcriptomics

Job Description

Roles & Responsibilities:

We are inviting applications for a Postdoctoral Research Fellowship position in large scale data science, biostatistics, and multi-omics modeling with a specific interest in complex human diseases. This work will have a particular focus on the host response to SARS-CoV-2 infection with the newly founded Mount Sinai Clinical Intelligence Center and the division of Data Driven and Digital Medicine. This post-doc will have the opportunity to work not only within our hospital network but also with several large consortia, with access to millions of patient electronic medical record data, large-scale whole-genome and exome-scale data on patients linked to medical record data, and deeply molecularly profiled patient and control populations specific to the diseases of interest.

Background: This position will be in the lab of Dr. Noam Beckmann, in the Department of Medicine in the Icahn School of Medicine at Mount Sinai in Manhattan, New York, NY, USA.

The main focus of this work will be to design and perform robust, large-scale analyses of longitudinal multi-omics and clinical data generated on populations of individuals to identify key regulatory components and mechanisms of complex biological processes and associated diseases and conditions, through advanced modeling of human diseases and wellness. Our lab has a large network of collaborations with both clinical and data generation groups working on these diseases as well as patient cohorts. We also have access to large longitudinal datasets spanning many omics dimensions (i.e. genetic, transcriptomic [bulk and single-cell], epigenomic, proteomic and metabolomic data) with some of these having longitudinal components.

Data and Resources

The candidate will have the opportunity to work with multi-scale data and large computational resources. Among these, access to Mount Sinai COVID-19 biobank datasets as well as to institutional high-performance computing cluster and lab servers.

The postdoctoral fellow will join a dynamic team of data scientists, computer scientists, geneticists, and clinicians and participate in unique opportunities to perform large multi-scale modeling of the host-response to SARS-CoV-2 infection to derive novel biological insights.

Requirements:

The ideal candidates will have some or most of the following background:

• PhD, MD, or MD/PhD in a quantitative science or related field (e.g., statistical genetics, computational genomics, biostatistics, systems biology, mathematics, physics, computer science, etc.)
• Statistics or systems biology training, including an interest in common biostatistical and machine learning frameworks such as predictive modeling, linear modeling, network modeling, and construction of robust classifiers of disease, disease conditions, resilience, and other clinical and molecular characteristics of interest.
• Expertise with programming and statistical software experience in R and/or Python. Additional programming languages are a plus.
• Strong publication track record.
• Strong communication and presentation skills with fluency in spoken and written English.
• Prior research experience with large scale omics analyses is a plus.

Strength Through Diversity

The Mount Sinai Health System believes that diversity, equity, and inclusion are key drivers for excellence. We share a common devotion to delivering exceptional patient care. When you join us, you become a part of Mount Sinai’s unrivaled record of achievement, education, and advancement as we revolutionize medicine together. We invite you to participate actively as a part of the Mount Sinai Health System team by:

• Using a lens of equity in all aspects of patient care delivery, education, and research to promote policies and practices to allow opportunities for all to thrive and reach their potential
• Serving as a role model confronting racist, sexist, or other inappropriate actions by speaking up, challenging exclusionary organizational practices, and standing side-by-side in support of colleagues who experience discrimination
• Inspiring and fostering an environment of anti-racist behaviors among and between departments and co-workers

We work hard to acquire and retain the best people and to create an inclusive, welcoming and nurturing work environment where all feel they are valued, belong, and are able to professionally advance. We share the belief that all employees, regardless of job title or expertise, contribute to the patient experience and quality of patient care.

Explore more about this opportunity and how you can help us write a new chapter in our history!

EOE including Veterans and Disabled

Compensation

The Mount Sinai Health System (MSHS) provides a salary range to comply with the New York City Law on Salary Transparency in Job Advertisements. The salary range for the role is $58,661.00 - $60,788.00 Annually. Actual salaries depend on a variety of factors, including experience, education, and hospital need. The salary range or contractual rate listed does not include bonuses/incentive, differential pay or other forms of compensation or benefits.