Job Description

The Role

We are seeking a visionary and hands-on leader to spearhead our Applied AI group. This role sits at the intersection of cutting-edge AI technology and practical software engineering, driving the development of innovative AI-powered products and solutions.

  • Drive the productization of AI capabilities, transforming research breakthroughs into scalable, real-world applications
  • Collaborate with scientists to develop novel interfaces and user experiences for scientific AI
  • Lead and grow a technology team, fostering a culture of innovation, speed, and continuous learning
  • Evaluate and implement a wide range of AI models, from internally trained models to commercial and open-source options, including both LLMs and specialized scientific ML
  • Develop and maintain a robust AI engineering stack, including tools for fine-tuning, prompt chaining, retrieval (RAG), and emerging autonomous agent technologies
  • Stay current with the rapidly evolving AI landscape, including new papers, models, and techniques
  • Establish best practices for AI engineering, including prompt engineering, model evaluation, and automated fine-tuning

Qualifications:

  • Proven experience in software engineering, with strong AI/ML expertise
  • Deep understanding of large language models (LLMs) and their practical applications
  • Proficiency in Python and experience in common AI/ML frameworks
  • Familiarity with cloud platforms and GPU infrastructure for AI workloads
  • Experience delivering AI solutions toward valuable products
  • Excellent communication skills, able to work with stakeholders across many technical disciplines
  • Track record of leading and mentoring engineering teams

Preferred Experience:

  • History of shipping heavily used, AI-powered software products
  • Experience with AI-specific infrastructure, including GPU clusters, LLM APIs, and model serving technologies

Working at FL97, you would have access to advanced technology in the areas of:

  • AI experimental design and simulation
  • Customized LLM tools and agents
  • Top-notch scientists across physical and life sciences

More About Flagship Pioneering

Flagship Pioneering is a biotechnology company that invents and builds platform companies, each with the potential for multiple products that transform human health or sustainability. Since its launch in 2000, Flagship has originated and fostered more than 100 scientific ventures, resulting in more than $90 billion in aggregate value. Many of the companies Flagship has founded have addressed humanity’s most urgent challenges: vaccinating billions of people against COVID-19, curing intractable diseases, improving human health, preempting illness, and feeding the world by improving the resiliency and sustainability of agriculture. Flagship has been recognized twice on FORTUNE’s “Change the World” list, an annual ranking of companies that have made a positive social and environmental impact through activities that are part of their core business strategies, and has been twice named to Fast Company’s annual list of the World’s Most Innovative Companies. Learn more about Flagship at www.flagshippioneering.com.

Flagship Pioneering and our ecosystem companies are committed to equal employment opportunity regardless of race, color, ancestry, religion, sex, national origin, sexual orientation, age, citizenship, marital status, disability, gender identity or Veteran status.

At Flagship, we recognize there is no perfect candidate. If you have some of the experience listed above but not all, please apply anyway. Experience comes in many forms, skills are transferable, and passion goes a long way. We are dedicated to building diverse and inclusive teams and look forward to learning more about your unique background.

Company Info.

Flagship Pioneering

Flagship Pioneering is an American life sciences venture capital company based in Cambridge, Massachusetts that invests in biotechnology, life sciences, health and sustainability companies. Portfolio companies include Moderna, Indigo Agriculture, Inari Agriculture and Novomer.

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